CDS

Accession Number TCMCG006C17858
gbkey CDS
Protein Id XP_022558782.1
Location complement(join(9822115..9822161,9822232..9822799,9823050..9823131,9823214..9823326,9823484..9823615,9823692..9823875,9824045..9824178,9824368..9824472,9824561..9824662,9824819..9824911,9824983..9825300,9825433..9825534,9825624..9825686,9825838..9826321,9826607..9826761,9827137..9827661,9827739..9827780,9827865..9827996,9828085..9828149,9828224..9828457,9829231..9829303,9829379..9829606))
Gene LOC106452142
GeneID 106452142
Organism Brassica napus

Protein

Length 1326aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022703061.1
Definition protein TSS isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Translation initiation factor eIF3 subunit 135
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K03255        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCACCGAGGTCAAGCAAAGGGAAGTCAAACAGAGGGAAAGGAGAGAAGAAGAAGAGAGAAGAGAAAGTGTTGGTGCCGAGTCTGGTTGATATCACAGTCACGACTCCTTACGAAACACAAGTGATACTCAAAGGAGTCTCTACTGACAAGATCATTGATGTGAAAAGGCTTCTGGCATCTCATGTTGACACTTGCCACCTCACCAACTATTCCCTCTCGCATCAGGTGAAAGGGCATAGATTGAGTGATAACATCCAAGTGGTTACCCTCAAGCCTTCTGTCCTCCGTATGATTCCGGAGAACTACGTGGAGGAAAGTCAAGCTTTGACTCAGGTGCGGAGAGTCCTAGACATCGTAGCGTGCACCACCAGGTTCTCCTCCGTCTCCAAAGCTTCTTCCAACAAACTCATCGCCGTCGGAAATGGCAATCCGGCAGCGGAGGGACTGGACATGGTCGCTATCCACCCGACGCCCAAGCTCTCTCAATTTTACGAGTTTTTCTCCATTCCCAACGTCTCTCCTCCGATTCTTCAGTTGAAGAAAGTGGATGGTGAAGAAGCTGGAGAGAGGCGTGATGGTGACTATTTTGAACTTAAGGTCAAGATATGCAATGGGAAGGTTATACATGTGGTTGCATCGGTTAAAGGTTTCTTTGCCGTTGGGAAGCAGCTCTCTCATACCCATTCCATTGTTGATTTGCTTCAGAATGTCAGCAATGCTTTTGCCAAGGCTTATGAGTCACTGATGAAAGCTTTCACTGACCGGAATAAGTTTGGCAACCTTCCGTATGGGTTACGCACAAACACGTGGCTTGTACCCCCTTCTGAGTCTTTATCAACCTTCTCCCCTTTACCAACAGAGGATGAAAACTGGGGAGGGAACGGTGGAGGCCAGGGGAGGAATGGTGAACATGATCTTCGTCCCTGGGCGGCTGAGTTTTCTGTGTTAGCTACGCTTCCTTGCAAGACTGAGGAGGAGAGGGTTATTCGTGATAAGAAGGCTTTTCTGCTTCATAACCTGTTTGTTGATGCCTCTGTTCGAAGAGCTGTTAGAGCCATTTCCGACGTGATTGGTACTAATCAACGCACAAGTGGAACTAGTGACTTCCCTGCAGGCTCCATCCTTCTTGAAGATCGGGTTGGAGATTTGTCTATTATTGTAAAACGTGATGTTGCCGGCCTTGACCAGAATCCTAAAGGTGCATTTCAAAATGAAGCATTTCCTTTGTCATCCAAGGAACTTAGTGAAAGGAATCTGCTAAAAGGGATAACAGCTGATGAGAGTGTCATTGTTCACGATATTTGGGCTTTAAGCACAGTTATTGTAAAGCACTGTGGATATACAGCGGTGGTAAATGTCAAGGGCGAAACTAAGAAGGGAATGGCTGGTTTACGTGATATTGTGATCGATGACTTACCGGATGGAGGAGCTAATGCTCTTAACCTTAACAGCTTAAGGGTTCAGCTTCACAGGTCCCATAGTGTCGGAAAATCTGGAGGGAACCAGCCTCCACAGTTTGATTTGGATGATTTAGAGTCTTTTAGATGTTTGGTACATGAACTAGTTAAAAATAACCTAACGAAGTTAGAAGAAGAAAGGGAATCTTCCGAAAGGTCCATCAGATGGGAGCTCGGTTCTTGCTGGGTTCAGCATCTACAAAAGAAAGAAACAGTAACGGAAGATCTCTGTGGGAAGCCTGCAATGAATGGTGAGACTGACCTTTCAGTCAAAGGTTTGGGGAAACAATTTAAAGTTCTAAAGATGAAAAATAAGAAATCAGAAAATACAAGTACCGTGAAGGGAAAGGAAGAAAATATCAGTCTACGCGAGTTAGATGGGGAGGCTGATCAACACTTTGAGGCTGAACTGAAGGAACTGGTTTCTGAAGAAGCTTTCTCTCGCCTAAAAGAAAGTGGAACTGGTCTCCATTTAAAGTCAAAAGAAGAGCTTACCAAGATGGTATATGGATACTATGATGAAATTGCTTTGCCAAGGCTGGTAGCAGATTTTGGGTCCCTGGAGCTTTCTCCAGTTGATGGCCGCACAATGACAGACTTCATGCATATTAGAGGACTCCAAATGCGTTCTCTAGGACATGTGGCTAAACTTGCTGAGGACCTTCCTCACATACAGTCCCTCTGTATTCATGAGATGATTACGAGAACTTTCAAGCATCTTCTTAGGGCGGTTATTGCATCTATCAATAAGATGGCAGAGCTACCTGGGGCTATAGCTGCGTCATTAAATTTCATGCTTGGCCTCCATGGGTTGGAAGGGAGTGATGGAATCTCCAGTGAAGAGTCTTGTCTCAGATTACAGTGGCTACAGAAATTTCTCTCCACTAGATTTGGTTGGATACAGAAAGATGAGTTCAAGCATTTGAATAAAGTTTCCATTCTCCGAGGACTTTGCCAGAAGGTTGGGTTAGAACTAATTCCAAGAGATTATGACTTCGATTCTCCAAATCCCTTTAAGAGCTCTGATGTTTTTGGCTTGATACCTGTGTGCAAGCATGTGCTATGCGTTTCATCTGACGGAAGGACACTCTTGGAGTCATCAAAACTTGCTCTTGACAAAGGAAAACTAGATGATGCTGTCAACCATGGAACAAAGGCATTAGCCAAGATGATTGCTGTCTGTGGACCTTATCATAAAAATACTGCTTGTGCGTACAGCCTTCTAGCCGTTGTACTGTACCACACTGGCGATTTTAACCAGGCAACTATATATCAACAGAAGGCTCTGGATATAAATGAAAAAGAACTTGGTCTCGACCATCCCGACACTATGAAAAGCTATGGGGATCTTTCTGTATTTTATTATCGCCTTCAGCACATTGAGTTGGCACTGAAATATGTGAACCGTGCTTTGTTTCTTCTTCATTTCACTTGTGGGCTATCTCACCCGAATACTGCTGCCACATATATTAATGTGGCTATGATGGAGGAAGGAGTAGGGAACGTTCATCTAGCTCTAAGATACCTACATGAAGCTCTAAAGTGCAATAAACGATTGCTAGGAGCTGACCATATTCAGACAGCAGCAAGCTATCATGCAATAGCTGTGGCTCTCTCTCTCATGGAAGCATATTCATTGAGTGTGCATCATGAACAGACTACACTTCAGATACTTACAAAAACACTTGGATCAGATGACCTTCGTACACAGGATGCTGCTGCATGGCTTGAATATTTTGAATCAAGGGCCATAGAGCAGCAGGAAGCAGCTCGAAATGGAATCCCAAAGCCTGATGCTTCCATTGCGAGCAAAGGCCACCTTAGTGTAGAAGATCTTATGGACTATATAAGTTCTGATCCAGACAATAAAGGAAGTGTTGTTCACAGAAAACTGCGGCGTCTCACTGTTTCACCGGTCAGTGATAGTGGTGCATCAGCTGATGATGCTACCCACTCCGTTGCTTCACAGCATGGCATGGCTACATTGAACGACGTGGTAGAAACAAATGTCACTGAGAGTAAGAACGAAGTAAATGATCCTAATGCCGTTGTGGATGAGGTCGAAATAGAGACGGGTGATACTTTAGTACACAGGCTAAATGTAGACAACCAAACTGTGGAAGAGTCAGCTTTAGGTGAGGGCTGGCAAGAGGCTTACCCAAAGGGGAGATCCGGAAATGGTGCTAGAAAGAAATTTAGACAAAGGCAGCCTTATCAGAGAGTGTCGCTTAATAGAAATCTCAATGGAAGACAGGATGTTCATCAACATTATATAGCTTCTCCCTTGCAGAAAACGACTCCAAGACCCTCACTCTCTAAGCCATCATCTCTTAGGGCTCTGAAGAATGGAGAGATAGATGTCAGTAAAAAAACAATTAAGCCACAAATAAAGTCTCCTGGTTATGCTGCGGCGACCAGTACTACTTTGGCTTCAAAGTCACTCTCATACAAAGAGGTTGCTTTGGCACCACCAGGATCTCAAGTTCATCAACCGGAGAAGAAAGCAAGTCTGATGCTGTAA
Protein:  
MAPRSSKGKSNRGKGEKKKREEKVLVPSLVDITVTTPYETQVILKGVSTDKIIDVKRLLASHVDTCHLTNYSLSHQVKGHRLSDNIQVVTLKPSVLRMIPENYVEESQALTQVRRVLDIVACTTRFSSVSKASSNKLIAVGNGNPAAEGLDMVAIHPTPKLSQFYEFFSIPNVSPPILQLKKVDGEEAGERRDGDYFELKVKICNGKVIHVVASVKGFFAVGKQLSHTHSIVDLLQNVSNAFAKAYESLMKAFTDRNKFGNLPYGLRTNTWLVPPSESLSTFSPLPTEDENWGGNGGGQGRNGEHDLRPWAAEFSVLATLPCKTEEERVIRDKKAFLLHNLFVDASVRRAVRAISDVIGTNQRTSGTSDFPAGSILLEDRVGDLSIIVKRDVAGLDQNPKGAFQNEAFPLSSKELSERNLLKGITADESVIVHDIWALSTVIVKHCGYTAVVNVKGETKKGMAGLRDIVIDDLPDGGANALNLNSLRVQLHRSHSVGKSGGNQPPQFDLDDLESFRCLVHELVKNNLTKLEEERESSERSIRWELGSCWVQHLQKKETVTEDLCGKPAMNGETDLSVKGLGKQFKVLKMKNKKSENTSTVKGKEENISLRELDGEADQHFEAELKELVSEEAFSRLKESGTGLHLKSKEELTKMVYGYYDEIALPRLVADFGSLELSPVDGRTMTDFMHIRGLQMRSLGHVAKLAEDLPHIQSLCIHEMITRTFKHLLRAVIASINKMAELPGAIAASLNFMLGLHGLEGSDGISSEESCLRLQWLQKFLSTRFGWIQKDEFKHLNKVSILRGLCQKVGLELIPRDYDFDSPNPFKSSDVFGLIPVCKHVLCVSSDGRTLLESSKLALDKGKLDDAVNHGTKALAKMIAVCGPYHKNTACAYSLLAVVLYHTGDFNQATIYQQKALDINEKELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGVGNVHLALRYLHEALKCNKRLLGADHIQTAASYHAIAVALSLMEAYSLSVHHEQTTLQILTKTLGSDDLRTQDAAAWLEYFESRAIEQQEAARNGIPKPDASIASKGHLSVEDLMDYISSDPDNKGSVVHRKLRRLTVSPVSDSGASADDATHSVASQHGMATLNDVVETNVTESKNEVNDPNAVVDEVEIETGDTLVHRLNVDNQTVEESALGEGWQEAYPKGRSGNGARKKFRQRQPYQRVSLNRNLNGRQDVHQHYIASPLQKTTPRPSLSKPSSLRALKNGEIDVSKKTIKPQIKSPGYAAATSTTLASKSLSYKEVALAPPGSQVHQPEKKASLML